RetrogeneDB ID: | retro_etel_100 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_1818:160174..160583(-) | ||
Located in intron of: | ENSETEG00000000719 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000013764 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 64.75 % |
Parental protein coverage: | 86.71 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | MAEQAPKSVLFVCLGNICRSPIAEAVFR-KLVTDQNLLDKWIIDSGAVSDWNVGRSPDPRAVSYLGSHDI |
MAEQ.PK.VLFVCL.NIC.SP.AEAVF..KLVT.QNLLDKW.I.S.A.S....G..PD.R.......... | |
Retrocopy | MAEQVPK*VLFVCLSNIC*SPTAEAVFK<KLVTNQNLLDKWRIESRATSSYETGNLPDYRGQNCMKKLGD |
Parental | NSAHKARQITKE-DFATFDFILCMDESNLRDLTRKGNQVKNCKAKIELLGNYDPQKQVIIEDPYYGNDS |
...H..R.ITKE.DF...D.ILC.DE.NLR.LTRKGNQVKNC..KIELLGN.DPQKQ.IIE.PYYG.DS | |
Retrocopy | PMNHIVRPITKE<DFGYWD*ILCVDEHNLRALTRKGNQVKNCNTKIELLGNCDPQKQLIIEHPYYGHDS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |