RetrogeneDB ID: | retro_chof_1447 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_29617:878..1351(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000003891 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 74.84 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MAAQPPKSVLFVCLGNICRSPIAEAVFRKLVTDQ-NISDNWIIDSGAVSDWNVGRSPDPRAVSCLRNHDS |
MA.Q.PK.VLFVCLGNICRSPIAEAVFRKLVTDQ.NISDNW.IDS...S....G..PD.R...C...H.. | |
Retrocopy | MAVQLPKLVLFVCLGNICRSPIAEAVFRKLVTDQ<NISDNWRIDSTETSTEEIGNPPDYRGQNCMKKHEI |
Parental | NTAHKARQVTKEDFATFDYILCMDESNLRDLNRKGSAVKNRKAKIELLGSYDPQKQLIIEDPYYGNDSDF |
.....A.QVTKEDFATFDY.LCM.E.NLRDLNRKGS.VKN.KA..ELL.SYDPQKQLIIEDPYYGNDS.F | |
Retrocopy | PMNQVASQVTKEDFATFDYLLCMYENNLRDLNRKGSEVKNCKARTELLESYDPQKQLIIEDPYYGNDSCF |
Parental | ETVYQQCVRCCKAFLEKSQ |
ETV.QQC.RCCKAFLEKSQ | |
Retrocopy | ETVDQQCFRCCKAFLEKSQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |