RetrogeneDB ID: | retro_etel_1718 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_289742:38444..38881(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000013764 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 52.03 % |
Parental protein coverage: | 93.04 % |
Number of stop codons detected: | 7 |
Number of frameshifts detected | 1 |
Parental | AEQAPKSVLFVCLGNICRSPIAEAV-FRKLVTDQNLLDKWIIDSGAVSDWNVGRSPDPRAVSYLGSHDIN |
AEQ.PKS.LFVCLGNIC.S..AE.V.F.K..T....L.K....S.A.S....G...D.........HDI. | |
Retrocopy | AEQFPKSMLFVCLGNICQSSMAEMV<FQKI*TCLKPLAKRT-NSAATSSYEIGHPADY*G*HFKRKHDIP |
Parental | SAHKARQITKEDFATFDFILCMDESNLRDLTRKGNQVKNCKAKIELLGNYDPQKQVIIEDPYYGNDSDFE |
..H.A.Q.....FATFD.ILC.D.SNL.DL.RKGN.VKN.KA..ELLGN.D..K....ED.YYG..S.FE | |
Retrocopy | IDHIAQQVNQKYFATFDYILCVDKSNL*DLNRKGNLVKNFKAEFELLGNFDS*K*FLFEDTYYGSNSGFE |
Parental | TVYQQCLR |
.VY..C.R | |
Retrocopy | NVYL*CVR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |