RetrogeneDB ID: | retro_chof_2542 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_83962:3216..3656(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000003891 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 67.11 % |
Parental protein coverage: | 92.41 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAAQPPKSVLFVCLGNICRSPIAEAVFRK--LVTDQNISDNWIIDSGAVSDWNVGRSPDPRAVSCLRNHD |
MAAQP.K.VLFVCLGNI...PIAEAVF.K..L...QNISDNW.IDS.A.S....G.SPD.....C...HD | |
Retrocopy | MAAQPTKWVLFVCLGNIS*TPIAEAVFQKTFLKIFQNISDNWKIDSAATSIYKIGNSPDYQGQNCMKKHD |
Parental | SNTAHKARQVTKEDFATFDYILCMDESNLRDLNRKGSAVKNRK-AKIELLGSYDPQKQLIIEDPYYGNDS |
......A.QVTKEDFATFDYILCMDESNLRDLNRK....K..K..K.ELLGSYD.QKQLIIEDPYY.NDS | |
Retrocopy | IPMNRIAWQVTKEDFATFDYILCMDESNLRDLNRK-RKLKTAK<VKTELLGSYDLQKQLIIEDPYYENDS |
Parental | DFETVYQQC |
D.ETV...C | |
Retrocopy | DSETVPAVC |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |