RetrogeneDB ID: | retro_etel_2133 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_72339:673..1079(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000013764 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 56.12 % |
Parental protein coverage: | 86.71 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 2 |
Parental | APKSVLFVCLGNI-CRSPIAEAVFRKLVTDQNLLDKWIIDSGAVSDWNVGRSPDPRAVSYLGSHDINSAH |
AP.SVL..CL.NI.C.SPIAEA.FRKLVT.QNLLDKW.I.S.A......G..P.......L..H...... | |
Retrocopy | APRSVLVTCLDNI<CPSPIAEAIFRKLVTHQNLLDKWRIGSAATFT*EIGNPPGYQRQNCLKQHGLP*V- |
Parental | KARQITKEDFATFDFILCMDESNLRDLTRKGNQVK-NCKAKIELLGNYDPQKQVIIEDPYYGNDSDFET |
.A.....ED.AT.D.I..MD.SNL.D..RKGNQVK.N.KA.IEL.G.YD.....I.EDPY.GNDSDFET | |
Retrocopy | SAPEMANEDCATLDYIPRMDDSNL*DVARKGNQVK<NGKATIELRGSYDRPE*LIHEDPYHGNDSDFET |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |