RetrogeneDB ID: | retro_etel_1861 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_308846:7201..7525(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000009454 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000013764 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.3 % |
Parental protein coverage: | 67.72 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | VGRSPDPRAVSYLGSHDINSAHKARQITKEDFATFDFILCMD-ESNLRDLTRKGNQVKNCKAKIELLGNY |
VG.SPDP.AV..LGSHDINSAHKARQ.TK.DFAT.D..LCMD..SN.RDLT.KGNQVK.C.A..E.LG.Y | |
Retrocopy | VGQSPDP*AVHCLGSHDINSAHKARQVTKDDFATLDYLLCMDGKSNRRDLTGKGNQVKSCRANLEQLGSY |
Parental | DPQKQVIIEDPYYGNDSDFETVYQQCLRCCKAFLEKAS |
DP.KQ.I..DPY..NDSDFETV..QC.RCCK...EKAS | |
Retrocopy | DPYKQRITDDPY*RNDSDFETVCRQCHRCCKTCVEKAS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |