RetrogeneDB ID: | retro_chof_1265 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_240609:839..1312(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000003891 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.07 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAAQPPKSVLFVCLGNICRSPIAEAVFRKLVTDQNISDNWIIDSGAVSDWNVGRSPDPRAVSCLRNHDSN |
MA.QPPK.VLFVCLGNIC.SPIAEAV..KL.TDQNISDNW.IDS.A......G..PD.....C...HD.. | |
Retrocopy | MAVQPPKLVLFVCLGNIC*SPIAEAVSKKLITDQNISDNWRIDSVATPTYEIGNPPDYQGQNCMKKHDIP |
Parental | TAHKARQVTKEDFATFDYILCMDESNLRDLNRKGSAVKNRKAKIELLGSYDPQ-KQLIIEDPYYGNDSDF |
..H.A.QV.KEDF.TFDYILCMDESNL..LNRK.S.VKN...KIELLG.YDPQ.K..IIEDPYYGNDS.F | |
Retrocopy | MNHVAWQVIKEDFVTFDYILCMDESNLGYLNRKVSEVKNHEVKIELLGRYDPQ<KKQIIEDPYYGNDSNF |
Parental | ETVYQQCVRCCKAFLEKSQ |
ETVY.QCV.CCKAFLEKSQ | |
Retrocopy | ETVYKQCVSCCKAFLEKSQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |