RetrogeneDB ID: | retro_chof_1412 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_285332:672..1142(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000003891 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.88 % |
Parental protein coverage: | 99.37 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MAAQPPKSVLFVCLGNICRSPIAEAVFRKLVTDQNISDNWIIDSGAV-SDWNVGRSPDPRAVSCLRNHDS |
MA.Q.PKSVLFVCLGNIC.SPIAE.VFRKLVT..NISDNW.IDS.A.......G..PD.....C...H.. | |
Retrocopy | MAVQLPKSVLFVCLGNICLSPIAEVVFRKLVTNLNISDNWRIDSTAT<TIYETGNPPDYQEQNCMKRHGI |
Parental | NTAHKARQVTKEDFATFDYILCMDESNLRDLNRKGSAVKNRKAKI-ELLGSYDPQ-KQLIIEDPYYGNDS |
.....A.QVTKEDFAT.DYIL.MDESNLR.LNRK.S.VKN.KAKI.ELLGSYDPQ.KQLIIEDPYYGNDS | |
Retrocopy | PMNPVAWQVTKEDFATLDYILYMDESNLRGLNRKVSEVKNCKAKI>ELLGSYDPQ<KQLIIEDPYYGNDS |
Parental | DFETVYQQCVRCCKAFLEKS |
.FET...QCVRCCKAFLEKS | |
Retrocopy | NFETMHRQCVRCCKAFLEKS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |