RetrogeneDB ID: | retro_chof_934 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_171648:1357..1830(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000003891 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 74.53 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | MAAQPPKSVLFVCLGNICRSPIAEAVFRKLVTDQN-ISDNWIIDSGAVSDWNVGRSPDPRAVSCLRNHDS |
MAAQPPK.VLFVCLGNIC.SPIAEAVFRKLVTDQ..ISDN..IDS...S....G..PD.....C...HD. | |
Retrocopy | MAAQPPKLVLFVCLGNICQSPIAEAVFRKLVTDQK<ISDNCRIDSASTSTYETGNPPDY*GQNCKKKHDT |
Parental | NT-AHKARQVTKEDFATFDYILCMDESNLRDLNRKGSAVKNRKA-KIELLGSYDPQKQLIIEDPYYGNDS |
....HKARQVTK.D.ATFDYILCM.ESNLRDLNR.GS.VKN.KA.KIELLGSYDPQKQLI.EDPYYGN.S | |
Retrocopy | PM>IHKARQVTKDDLATFDYILCMNESNLRDLNRRGSEVKNCKA<KIELLGSYDPQKQLILEDPYYGNNS |
Parental | DFETVYQQCVRCCKAFLEKSQ |
DFET.YQQCVR.CKAF.E.SQ | |
Retrocopy | DFETMYQQCVRWCKAFVESSQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |