RetrogeneDB ID: | retro_chof_2532 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_83108:4700..5170(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000003891 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 62.73 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | MAAQPPKSVLFVCLGNICRSPIAEAVFRKLVTDQNISDNWIIDSGAVSDWNVGRSPDPRA-VSCLRNHDS |
M.A.P.KSVLFVCLGNIC.SPI.E.V.RK..T.Q.ISDN...DS........G...D......CL..H.. | |
Retrocopy | MTAWPAKSVLFVCLGNIC*SPITEEVLRKFATEQIISDNCRRDSATTFTQEIGNPLDYQG<ANCLKKHNI |
Parental | NTAHKARQVTKEDFATFDYILCMDESNLRDLNRKGSAVKNR-KAKIELLGSYDPQKQLIIED-PYYGNDS |
...H.A.Q.TK.DF.TFDYILCMD.SNL...NRKGS.VKN..KA.IELLGSY.P.KQL.IED.PY.GNDS | |
Retrocopy | PMNHVAQQITKLDFSTFDYILCMDASNLKYFNRKGSEVKNS<KANIELLGSYEPWKQL-IED>PYNGNDS |
Parental | DFETVYQQCVRCCKAFLEKSQ |
.FETV.QQC.RCCK.FLEKSQ | |
Retrocopy | SFETVHQQCARCCKVFLEKSQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |