RetrogeneDB ID: | retro_etel_170 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_2932:26559..26821(+) | ||
Located in intron of: | ENSETEG00000001970 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSETEG00000003715 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 71.28 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 5 |
Parental | MVQRLTYRR-RLSYNTASNKTRLSR-TPGNRIVYLYTKKVGKAPKSACGVCPGRL-RGVRAVRPK-VLMR |
M.Q..TYRR.RLSYNTASN.TRLSR.TP....VYLYTKKVG.APKSACGVC.GRL..GVRAVRPK.VL.R | |
Retrocopy | MAQCPTYRR<RLSYNTASNTTRLSR<TPVIKSVYLYTKKVGEAPKSACGVCAGRL<LGVRAVRPK<VLTR |
Parental | LSKTKK-HVSRAYGGSMCAKCVRD |
L.KT...HV.RA.GG...AK.V.D | |
Retrocopy | LAKTSN<HVRRASGGPTGAKHVQD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |