RetrogeneDB ID: | retro_etel_74 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_13:81924..82190(+) | ||
Located in intron of: | ENSETEG00000009160 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSETEG00000003715 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 88.89 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MVQRLTYRRRLSYNTASNK-TRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSK |
MVQRLTY..RLSYNT.SNK.TRLSRTPGNRIVYLYTKKVGKAPKSA.GVCPG.LRGVRAVRPKVLMRLSK | |
Retrocopy | MVQRLTYWHRLSYNTTSNK<TRLSRTPGNRIVYLYTKKVGKAPKSAGGVCPGQLRGVRAVRPKVLMRLSK |
Parental | TKKHVSRAYGGSMCAKCVRD |
TKKHV.RAY.G.MCAKC.RD | |
Retrocopy | TKKHVGRAYSGPMCAKCDRD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |