RetrogeneDB ID: | retro_nleu_1915 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397315.1:8220392..8220767(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSNLEG00000012934 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 87.2 % |
Parental protein coverage: | 53.88 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 0 |
Parental | GRWLQVLRMVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPK |
G..LQ..RMVQ.LT...RLSYNTASNKTRLS.TPGNRIVYLYTKKVGKAPKSACGV.PGRL.GVRAVRPK | |
Retrocopy | GHCLQAPRMVQHLT*QHRLSYNTASNKTRLS*TPGNRIVYLYTKKVGKAPKSACGVYPGRL*GVRAVRPK |
Parental | VLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVLKAQAQSQKAK |
VLMRLSKTKKHVSR.YGGSMCAKCVRDRIK.AFLI.EQKIVVKVLKA.AQS.KAK | |
Retrocopy | VLMRLSKTKKHVSRVYGGSMCAKCVRDRIKCAFLIKEQKIVVKVLKA*AQSEKAK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |