RetrogeneDB ID: | retro_etel_2066 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_45826:1210..1471(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSETEG00000003715 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 76.4 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKT |
MV..LTYRRRLSYNTASNKTR....PGN.IVYLYT.KVG.APKSACG.CPGRL.GV.AVRP.V..RLSKT | |
Retrocopy | MVLGLTYRRRLSYNTASNKTR*--IPGNIIVYLYTDKVGQAPKSACGMCPGRLLGVFAVRPEVCNRLSKT |
Parental | KKHVSRAYGGSMCAKCVRD |
K..VSR..GGS.CAKCV.D | |
Retrocopy | KTPVSRV*GGSVCAKCV*D |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |