RetrogeneDB ID: | retro_etel_756 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_159203:618..880(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSETEG00000003715 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 71.11 % |
Parental protein coverage: | 98.88 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPK-VLMRLSK |
M.QRLTYRR.LSY.TASNKT.LSRTPG.R.VYL.TKKVG.APKSACG.CPGRL.GV.AVRP..VL.RLS. | |
Retrocopy | MAQRLTYRRGLSYKTASNKTWLSRTPGHRSVYLATKKVGEAPKSACGMCPGRLGGVHAVRPR<VLTRLSR |
Parental | T-KKHVSRAYGGSMCAKCVR |
T..KH..RA..G..C..C.R | |
Retrocopy | T<RKHICRALAGPWC*MCPR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |