RetrogeneDB ID: | retro_etel_927 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_185425:984..1227(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSETEG00000003715 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 71.6 % |
Parental protein coverage: | 89.89 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | RLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKTK-KHVSRAY |
RLSY...SNK.RL..TP.NRIV.LY.K...KA.KSACGVCPGRL.GV..VRPKV.MRL...K.K.VSRAY | |
Retrocopy | RLSYRSTSNKIRLF*TPRNRIVFLYMKRLDKAQKSACGVCPGRL*GVPTVRPKVFMRLPFQKSKNVSRAY |
Parental | GGSMCAKCVRD |
GGSMCAKCV.D | |
Retrocopy | GGSMCAKCVQD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |