RetrogeneDB ID: | retro_etel_274 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_4583:64572..64829(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSETEG00000003715 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 67.82 % |
Parental protein coverage: | 93.26 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | LTYRRRLSYNTASNKTRLSRTPGN-RIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRP-KVLMRLSKTKK |
LT...RL.YNTASNKTRLS..P...RIVYLYT.K.GK.P.SAC...P..L.G..AVR..K.LMRLSKT.K | |
Retrocopy | LTHYCRLPYNTASNKTRLSGAPCS>RIVYLYTRKFGKVPQSACDLSPA*LQGFHAVRL>KGLMRLSKTNK |
Parental | --HVSRAYGGSMCAKCV |
..HVSRA.GGSMCAKCV | |
Retrocopy | QNHVSRADGGSMCAKCV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |