RetrogeneDB ID: | retro_etel_380 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_6560:55823..56016(+) | ||
Located in intron of: | ENSETEG00000013704 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSETEG00000003715 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 64.18 % |
Parental protein coverage: | 73.03 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | MVQRL-TYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKV-GKAPKSACGVCPGRLRGVRAVRPKVLM |
MVQRL.TY..RLSY.T.S..TRLS.T...RIV.L..K....KA.K.ACG.CPGRL.GV.AVRP.VLM | |
Retrocopy | MVQRL<TYWHRLSYQTTSDNTRLS*TLHKRIVHLNRKNA<YKASKPACGMCPGRL*GVCAVRP*VLM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |