RetrogeneDB ID: | retro_etel_429 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_7101:9299..9564(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSETEG00000003715 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 88.76 % |
Parental protein coverage: | 98.88 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | VQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKK-VGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKT |
VQRLTYRRRLSYNTASNK.RLSRTPGNRIVYLYTK..VGKAPKSACGVCPGRL.GVRAVRP.VLMRLS.. | |
Retrocopy | VQRLTYRRRLSYNTASNKARLSRTPGNRIVYLYTKN>VGKAPKSACGVCPGRL*GVRAVRPRVLMRLSXX |
Parental | KKHVSRAYGGSMCAKCVRD |
...VSRAYGGSMCAKCVRD | |
Retrocopy | XXXVSRAYGGSMCAKCVRD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |