RetrogeneDB ID: | retro_nleu_553 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397267.1:2481775..2482207(-) | ||
Located in intron of: | ENSNLEG00000000678 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSNLEG00000012934 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 57.14 % |
Parental protein coverage: | 61.21 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | PLYLTFELAK---AFSFLFRGRWLQVLRMVQRLTYRRRLSYNTASNKTRLSRT-PGNRIVYLYTKKVGKA |
P.YL..........F..LF....L..L.M.Q..TY.R.LSYNTASNKT.LS.T.PGN..VY...K..G.. | |
Retrocopy | PSYLKYKIILP*LSFFYLFGRHCLEALIMAQHWTYCRKLSYNTASNKTKLSQT<PGNTVVYCNIKTFGET |
Parental | PKSACGVCPGRLRGVRAVRPKVLMRLSKT-KKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVLKAQ |
PKSACGV.PG...G..AVRP.VLMRLS...KKH..RA.GG.MCA.CV..RIK..FLI.EQKI..K..K.Q | |
Retrocopy | PKSACGVYPGTF*GLLAVRPEVLMRLSRR>KKHANRACGGAMCAECVYGRIKHVFLIREQKI-MKEFKVQ |
Parental | AQSQKAK |
AQSQ.AK | |
Retrocopy | AQSQNAK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |