RetrogeneDB ID: | retro_amel_222 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192356.1:2788421..2788794(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSAMEG00000015647 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 61.9 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAPAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMG-TPDVRIDTRLN |
MA.AKKGGEK.KG.S.I.EVVTRE....I.K..HGV..KK....A.KE..KFAMKEMG.TPD..I..RLN | |
Retrocopy | MASAKKGGEKRKGHSVITEVVTREHIVTINK*-HGVDLKKCVLWAVKETQKFAMKEMG>TPDGCIVIRLN |
Parental | KAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
K.VWAKGIRNVPYRI.V.LSRK....ED.P.....LVT.V.V.T..NLQ...V.EN | |
Retrocopy | KSVWAKGIRNVPYRIYVCLSRKHSKNEDAPSMRCILVTCVLVSTYENLQIAIVGEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |