RetrogeneDB ID: | retro_lafr_778 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_38:5749952..5750259(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSLAFG00000029162 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSLAFG00000027873 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.36 % |
Parental protein coverage: | 84. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MAPAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK |
M.P.KKGG.KK.G.S.INE.V.RE.TIN.HK.I.GVGFKK.APRALK.I.K.A.KEM.TPD...DTRLN. | |
Retrocopy | MVPTKKGG-KKRGGSTINEMVNREDTINMHKCIYGVGFKKYAPRALK-IWKSALKEMRTPDMHVDTRLNR |
Parental | AVW-AKGIRNVPY-RIRVRLSRKRNEDEDSPNKLYTL |
.VW..KGIRNVP...I.V.LS...NEDED.P.KL.TL | |
Retrocopy | DVW<VKGIRNVPH<PIHVWLSTNYNEDEDPPDKLSTL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |