RetrogeneDB ID: | retro_etel_1301 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_244121:297..749(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 84.21 % |
Parental protein coverage: | 96.18 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | SPATAPHPLKMYACAKFVSTPSLVRSTSQLLSRPLSVLVQKRPETLSDERFSSLTAPRSQTS-LVPSRSF |
S.ATAPHPLKMYACAK..STP.LVRSTSQ.LS..LSVL.QK.P.TL.DERFSSLTAPRS.TS...PSRS. | |
Retrocopy | SRATAPHPLKMYACAKCISTPALVRSTSQQLS*LLSVLLQKWPKTLTDERFSSLTAPRSLTS<IIPSRSI |
Parental | QTSTVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLF |
QTSTVSRDIDTA.KFIGAGAATVGVAGSGAGIGT.FGSL.IG.AR.PSLKQQ.FSY.ILGFALSEAMGLF | |
Retrocopy | QTSTVSRDIDTATKFIGAGAATVGVAGSGAGIGTGFGSLVIGHARKPSLKQQPFSYTILGFALSEAMGLF |
Parental | CLMVAFLILFAM |
CLMVAFLILF.M | |
Retrocopy | CLMVAFLILFVM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |