RetrogeneDB ID: | retro_etel_2142 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_75041:1306..1759(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 86.27 % |
Parental protein coverage: | 96.18 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | SPATAPHPLK-MYACAKFVSTPSLVRSTS-QLLSRPLSVLVQKRPETLSDERFSSLTAPRSQTSLVPSRS |
SPATAPHPLK.MYACAKFVSTPS.VRSTS.QLLS..LSV..QKR.ETL.DERFSS.TAP.SQTSL.PSRS | |
Retrocopy | SPATAPHPLK>MYACAKFVSTPSQVRSTS<QLLS*LLSVFLQKRTETLTDERFSS*TAPCSQTSLIPSRS |
Parental | FQTSTVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGL |
FQTST.SRDI..AAKFIGAGAATVG.AGSGAGIGTVFGSLIIG.ARNPSLKQQL.SYAILGFALSEAMGL | |
Retrocopy | FQTSTISRDINIAAKFIGAGAATVGTAGSGAGIGTVFGSLIIGDARNPSLKQQLSSYAILGFALSEAMGL |
Parental | FCLMVAFLILFAM |
FCLM.AFLILF.. | |
Retrocopy | FCLMLAFLILFTI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |