Parental gene:

ATP5G2, ENSPPYG00000004586

Aliases:None
Description:ATP synthase lipid-binding protein, mitochondrial precursor [Source:RefSeq peptide;Acc:NP_001125678]
Organism:Orangutan (Pongo abelii)
Coordinates:12:53437690..53449454(-)


>ENSPPYG00000004586
ATGCCTGAGCTGATCCTGTATGTTGCAATCACTCTATCCGTGGCTGAGCGACTCGTTGGCTTGGGTCACGCATGCGCTGA
GTCTTCCTTTCGCTCTTCCCGCTGCTCCGCCCCTCTCTGTCTTGTCTGCAGTGGGAGCAGCTCTCCTGCCACAGCCCCTC
ACCCCCTGAAAATGTTCTCCTGCTCCAAGTTCATCTCCACTCCCTCCTTGGTCAAGAGCACCTCACAGCTGCTGAGCCGT
CCGCTATCTGCAGTGGTGCTGAAACGACCGGAGATACTGACAGATGAGAGCCTCAGCAGCTTGGCAGTCTCACGTCCCCC
TACCTCACTTGTCTCTAGCCGCAACTTCCAAACCAGTGCCATTTCAAGGGACATCGACACAGCAGCCAAGTTCATTGGAG
CTGGGGCTGCCACAGTTGGGGTGGCTGGCTCTGGGGCTGGGATTGGGACTGTGTTTGGGAGCCTCATCATTGGTTATGCC
AGGAACCCTTCTCTGAAGCAACAGCTCTTCTCCTACGCCATTCTGGGCTTTGCCCTCTCGGAGGCCATGGGGCTCTTTTG
TCTGATGGTGGCCTTTCTCATCCTCTTCGCCATGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 52 .19 RPM
SRP007412_cerebellum 28 .21 RPM
SRP007412_heart 55 .03 RPM
SRP007412_kidney 84 .42 RPM
SRP007412_liver 50 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000619 ortholog_one2one 18 retrogenes
Bos taurus ENSBTAG00000005735 ortholog_one2one 11 retrogenes
Cavia porcellus ENSCPOG00000022889 possible_ortholog 3 retrogenes
Equus caballus ENSECAG00000023021 ortholog_one2one 2 retrogenes
Erinaceus europaeus ENSEEUG00000003051 ortholog_one2one 1 retrogene
Echinops telfairi ENSETEG00000005968 ortholog_one2one 40 retrogenes
Felis catus ENSFCAG00000001502 ortholog_one2one 13 retrogenes
Homo sapiens ENSG00000135390 ortholog_one2one 6 retrogenes
Gorilla gorilla ENSGGOG00000015641 ortholog_one2one 5 retrogenes
Macropus eugenii ENSMEUG00000004661 ortholog_one2one 67 retrogenes
Microcebus murinus ENSMICG00000011686 ortholog_one2one 4 retrogenes
Myotis lucifugus ENSMLUG00000011860 ortholog_one2many 13 retrogenes
Macaca mulatta ENSMMUG00000016241 ortholog_one2one 3 retrogenes
Mustela putorius furo ENSMPUG00000005927 ortholog_one2one 6 retrogenes
Mus musculus ENSMUSG00000062683 ortholog_one2many 1 retrogene
Nomascus leucogenys ENSNLEG00000017686 ortholog_one2one 4 retrogenes
Oryctolagus cuniculus ENSOCUG00000008933 ortholog_one2one 4 retrogenes
Otolemur garnettii ENSOGAG00000003611 ortholog_one2one 4 retrogenes
Ochotona princeps ENSOPRG00000002978 ortholog_one2one 1 retrogene
Procavia capensis ENSPCAG00000008679 ortholog_one2one 3 retrogenes
Pongo abelii ENSPPYG00000008909 within_species_paralog 9 retrogenes
Pan troglodytes ENSPTRG00000005023 ortholog_one2one 6 retrogenes
Pteropus vampyrus ENSPVAG00000012291 ortholog_one2one 1 retrogene
Rattus norvegicus ENSRNOG00000015320 ortholog_one2one 6 retrogenes
Sorex araneus ENSSARG00000001027 ortholog_one2one 7 retrogenes
Sarcophilus harrisii ENSSHAG00000005726 ortholog_one2one 4 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000008217 ortholog_one2one 3 retrogenes
Tupaia belangeri ENSTBEG00000005748 ortholog_one2one 4 retrogenes
Tarsius syrichta ENSTSYG00000003433 ortholog_one2one 4 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_236 77.27 88.89
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2. retro_pabe_1211 76.52 91.49
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3. retro_pabe_1212 73.29 79.29
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4. retro_pabe_2073 80.62 80.81
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5. retro_pabe_2255 76.54 79.80
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6. retro_pabe_3088 56.94 71.21
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7. retro_pabe_3741 88.73 100.00
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Download FASTA sequences of all ENSPPYG00000004586 retrocopies