RetrogeneDB ID: | retro_tsyr_876 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_22662:4583..4882(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSTSYG00000003433 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 80.2 % |
Parental protein coverage: | 54.64 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | YSRPPAPVCLLCTGSSSPATAPHPLKMYACSKFISTPSLVKSTS-QLLSRPLTAVVLKRPETLPDESLSS |
......P.CLLCTGSSSP.TAPHPLKMY.CSKF.S.PSLV.STS.QLLSRPL.AVV.K.PET..DESLSS | |
Retrocopy | FQKMEEPFCLLCTGSSSPTTAPHPLKMYGCSKFTSIPSLV*STS<QLLSRPLMAVVQKQPETPSDESLSS |
Parental | LAVSHPLTSLVPSRSFQTSAVSRDIDTAAKF |
LAVSHPLTSLVPS.SFQTSAVSRDI.TAAKF | |
Retrocopy | LAVSHPLTSLVPSHSFQTSAVSRDINTAAKF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |