RetrogeneDB ID: | retro_amel_1322 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193194.1:855435..855881(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSAMEG00000000619 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 55.77 % |
Parental protein coverage: | 76.65 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | LCLLCTGSRLSATAPHPLKMYACAKFVSTPFLAKSTSQLLSRSLSAVVLKPPETLTDESLSSLAAPRPLT |
LCLLCT.S......PHPL...ACA..V.TPFL...TSQLL.RSL.A.VL..PETL.DESL.SLAAP.PLT | |
Retrocopy | LCLLCTQS--CSSTPHPLDLLACANLVCTPFLVRCTSQLLGRSLPAMVLNAPETLRDESLRSLAAPCPLT |
Parental | SLIPSRSFQTSAISRDIDTAAKFIGAGAATV-GVAGSGAGIGTVFG-SLIIGYA-RNPSLKQQL-FSYAI |
S..P..S..T.AISRDID.A..F.G.......G....G...G...G.SLI.GYA....SLKQ.L..SY.I | |
Retrocopy | SWSPNPSC*TMAISRDIDRASMFRGPRSVPQWGRLALGLCLGLCLG<SLITGYA<LDLSLKQRL<LSYTI |
Parental | L-GFALSEAMGLFCLM |
L.G...SEA.GL.CL. | |
Retrocopy | L<GLMFSEAKGLLCLL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |