RetrogeneDB ID: | retro_etel_636 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_11832:2233..2666(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 80.41 % |
Parental protein coverage: | 91.72 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | SPATAPHPLKMYACAKFVSTPSLVRST-SQLLSRPLSVLVQKRPETLSDERFSSLTAPRSQTSLV--PSR |
SPATAPHPLKMY.CAKFVSTP.LVR.T.SQLLSRPL.VLVQK.PET..DERFSSLTAPRS.TSL....SR | |
Retrocopy | SPATAPHPLKMYVCAKFVSTPALVRGT<SQLLSRPLCVLVQKQPETQTDERFSSLTAPRSLTSLILIASR |
Parental | SFQTST-VSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAM |
SFQTST.VSRDI.TAA.FIGAGAATVGVAGS.AGIGTVFGSLII.YARNPSLKQQL.SYAILGF.L...M | |
Retrocopy | SFQTST<VSRDIGTAARFIGAGAATVGVAGSRAGIGTVFGSLIIDYARNPSLKQQL-SYAILGFGLFCLM |
Parental | GLFCLMVA |
..F....A | |
Retrocopy | VAFLILFA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |