RetrogeneDB ID: | retro_amel_1077 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192886.1:870174..870626(-) | ||
Located in intron of: | ENSAMEG00000004032 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSAMEG00000000619 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 77.07 % |
Parental protein coverage: | 77.66 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | LCLLCTGS-RLSATAPHPLKMYACAKFVSTPFLAKSTSQLLSRSL-SAVVLKPPETLTDESL-SSLAAPR |
.CLLCTGS..LS..APH.LKM..CA.FVSTPFL..STSQLLS.SL...V...P.ETLTDESL.SSLA.PR | |
Retrocopy | ICLLCTGS<QLSCQAPHALKMCTCAEFVSTPFLVRSTSQLLSPSL<AVVLKPP-ETLTDESL<SSLAIPR |
Parental | PLTSLIPSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSG-AGIGTVFGSLIIGYARNPSLKQQLFSYAI |
PLTSLI.S..F...AISR.IDTAAKFIGA.AA.VG....G.AGIGTVFGSLIIGYARNPSLK.QLFSYAI | |
Retrocopy | PLTSLITSCRFHIGAISRVIDTAAKFIGAEAAMVGGGWLG<AGIGTVFGSLIIGYARNPSLKPQLFSYAI |
Parental | LGFALSEAMGLFCLMVA |
LGFALSEAMGLFCLMVA | |
Retrocopy | LGFALSEAMGLFCLMVA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |