RetrogeneDB ID: | retro_amel_1113 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192916.1:992428..992785(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSAMEG00000000619 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 80.33 % |
Parental protein coverage: | 77.92 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | SRSLSAVVLKPPETLTDESLSSLAAPRPLTSLIPSRSFQTSAISRDIDTAAKFIGAG--AATVGVAGSGA |
.RSLSAVVLKPPETLTD.SLSS..AP.PLTSLIP..SFQTS.ISRD.DTAAKF.GAG..A.TVGVAGS.A | |
Retrocopy | NRSLSAVVLKPPETLTDQSLSSWPAPHPLTSLIPNHSFQTSTISRDTDTAAKFTGAGARAVTVGVAGSAA |
Parental | GIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM |
GIGTV.G.LII..ARNPSLK.Q.FSYA.LGFAL..AMGLFCLMVAFLILF.M | |
Retrocopy | GIGTVPGILII--ARNPSLK*Q-FSYAVLGFALPKAMGLFCLMVAFLILFVM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |