RetrogeneDB ID: | retro_meug_1009 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold25774:26816..27301(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSMEUG00000004661 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 70.48 % |
Parental protein coverage: | 89.62 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | LSPPPLCLLCSA-GSS-SAAPHPLRMYACTKLISAPALVRSSSQLLSRPLSAVVLKRPEVRTDENLSILA |
..PP.LCLLCSA..SS.S.APHPLRMYA..K.IS.P..VRSSSQLLSR.LSAVVLKRPEVRTDEN..ILA | |
Retrocopy | IAPPSLCLLCSAHSSS<SFAPHPLRMYAYGKFISTPVFVRSSSQLLSRVLSAVVLKRPEVRTDENIGILA |
Parental | ASGPLTSLVPRCGFQTSAVSRDVDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSY |
AS.P.....P......S.VSRD.DT..KF.G.GAATVGVAGSGAGI...FG...IGYARN.SLKQQLFSY | |
Retrocopy | ASSP---HLPQMWIPISTVSRDIDTMTKFTGVGAATVGVAGSGAGIRHGFGNFLIGYARNSSLKQQLFSY |
Parental | AILGFALSEAMGLFCLMVAFLILFAM |
....FALSEAM.L..LMVAFLILF.M | |
Retrocopy | TMQDFALSEAMELCYLMVAFLILFTM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |