RetrogeneDB ID: | retro_etel_1420 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_262938:639..1094(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000017758 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 62.75 % |
Parental protein coverage: | 96.82 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | VSPATAPHPLKMYACAKFVSTPSLVRSTSQLLSRPLSVLVQKRPE-TLSDERFSSLTAPRSQTSLVPSRS |
..P......L.M.ACAK...TP.L.R..S....RP.S..V..RPE.....E....L.......S....R. | |
Retrocopy | LQPLLPEDSL*MFACAKLACTPALIRAGSRVAYRPMSASVL*RPE<SYTGEGSAVLNGTQAGVSPLIRRE |
Parental | FQTSTVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGL |
FQTS..SRDIDTAAK.IGAGAATV.VAGSGAGIG.VFGSL.IGY.RNPSLKQQLF.YA.LGFA.SEAMGL | |
Retrocopy | FQTSAISRDIDTAAKCIGAGAATVAVAGSGAGIGAVFGSLFIGYPRNPSLKQQLFPYATLGFASSEAMGL |
Parental | FCLMVAFLILFAM |
FCLMVAFLILFAM | |
Retrocopy | FCLMVAFLILFAM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |