RetrogeneDB ID: | retro_meug_230 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | GeneScaffold_6791:126941..127423(+) | ||
Located in intron of: | ENSMEUG00000013470 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSMEUG00000004661 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 87.65 % |
Parental protein coverage: | 87.43 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | PLCLLCSAG-SS-SAAPHPLRMYACTKLISAPALVRSSSQLLSRPLSAVVLKRPEVRTDENLSILAASGP |
PLCLLCSA..SS.S.APHPLRMY.C...ISAPALVRSS.QLLSRPLSAVVLK.PEVRTDENLSILAASGP | |
Retrocopy | PLCLLCSASSSS<SFAPHPLRMYTCARVISAPALVRSSPQLLSRPLSAVVLKWPEVRTDENLSILAASGP |
Parental | LTSLVPRCGFQTSAVSRDVDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG |
LTSLVPRCGFQTS.VSRD.DTAAKFIG.GAATVGVAGSGAG.GTVFGSLIIGY.RN.SLK.QLF.Y.ILG | |
Retrocopy | LTSLVPRCGFQTSSVSRDIDTAAKFIGDGAATVGVAGSGAGTGTVFGSLIIGYVRNSSLK*QLFFYTILG |
Parental | FALSEAMGLFCLMVAFLILFAM |
FALSEAMGLFCLMV.FLILFAM | |
Retrocopy | FALSEAMGLFCLMVVFLILFAM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |