Parental gene:

ENSMLUG00000011860

Aliases:None
Description:None
Organism:Microbat (Myotis lucifugus)
Coordinates:GL429927:2142189..2146435(-)


>ENSMLUG00000011860
AATTCCAGCTCCCCTCATCCCCTGAAAATGTATGCCTGCACCAAGTTTGTCTCCGCCCCCTCCTTGGTCCGGAGCACCTC
TCAGCTGAGCCGGTCAATGTCTGCAGTGGTGCTGAAACGACCAGAGACACTGACAGATGAGAGCCTCAGCAGCTTGGCAG
CCCCACGTCCCCTGACCTCGCTTATTTCTAGCCGTAGCTTCCAAACCAGTGCCATTTCAAGGGACATCGACACAGCAGCC
AAGTTCATTGGGGCTGGGGCTGCCACAGTAGGGGTGGCAGGCTCTGGGGCTGGAATTGGGACTGTGTTTGGGAGCCTCAT
CATTGGTTATGCCAGGAACCCTTCTCTGAAGCAACAGCTCTTCTCCTACGCCATTCTGGGCTTTGCCCTCTCAGAGGCCA
TGGGGCTCTTTTGCCTGATGGTGGCCTTTCTCATCCTCTTCGCCATGTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000619 ortholog_one2many 18 retrogenes
Bos taurus ENSBTAG00000005735 ortholog_one2many 11 retrogenes
Cavia porcellus ENSCPOG00000022889 possible_ortholog 3 retrogenes
Dipodomys ordii ENSDORG00000002955 possible_ortholog 1 retrogene
Equus caballus ENSECAG00000023021 ortholog_one2many 2 retrogenes
Erinaceus europaeus ENSEEUG00000003051 ortholog_one2many 1 retrogene
Echinops telfairi ENSETEG00000005968 ortholog_one2many 40 retrogenes
Felis catus ENSFCAG00000001502 ortholog_one2many 13 retrogenes
Homo sapiens ENSG00000135390 ortholog_one2many 6 retrogenes
Gorilla gorilla ENSGGOG00000015641 ortholog_many2many 5 retrogenes
Macropus eugenii ENSMEUG00000004661 ortholog_one2many 67 retrogenes
Microcebus murinus ENSMICG00000011686 ortholog_one2many 4 retrogenes
Myotis lucifugus ENSMLUG00000011738 within_species_paralog 4 retrogenes
Myotis lucifugus ENSMLUG00000012822 within_species_paralog 1 retrogene
Macaca mulatta ENSMMUG00000016241 ortholog_many2many 3 retrogenes
Mustela putorius furo ENSMPUG00000005927 ortholog_one2many 6 retrogenes
Mus musculus ENSMUSG00000062683 ortholog_many2many 1 retrogene
Nomascus leucogenys ENSNLEG00000017686 ortholog_one2many 4 retrogenes
Oryctolagus cuniculus ENSOCUG00000008933 ortholog_one2many 4 retrogenes
Otolemur garnettii ENSOGAG00000003611 ortholog_one2many 4 retrogenes
Ochotona princeps ENSOPRG00000002978 ortholog_one2many 1 retrogene
Procavia capensis ENSPCAG00000008679 ortholog_one2many 3 retrogenes
Pongo abelii ENSPPYG00000004586 ortholog_one2many 7 retrogenes
Pan troglodytes ENSPTRG00000005023 ortholog_one2many 6 retrogenes
Pteropus vampyrus ENSPVAG00000012291 ortholog_one2many 1 retrogene
Rattus norvegicus ENSRNOG00000015320 ortholog_one2many 6 retrogenes
Sorex araneus ENSSARG00000001027 ortholog_one2many 7 retrogenes
Sarcophilus harrisii ENSSHAG00000005726 ortholog_one2many 4 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000008217 ortholog_one2many 3 retrogenes
Tupaia belangeri ENSTBEG00000005748 ortholog_one2many 4 retrogenes
Tarsius syrichta ENSTSYG00000003433 ortholog_one2many 4 retrogenes
Vicugna pacos ENSVPAG00000000409 possible_ortholog 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mluc_106 96.43 93.96
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2. retro_mluc_516 73.10 96.64
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3. retro_mluc_575 100.00 99.33
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4. retro_mluc_656 62.92 57.72
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5. retro_mluc_1215 96.64 99.33
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6. retro_mluc_1335 87.16 99.33
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7. retro_mluc_1337 80.67 99.33
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8. retro_mluc_1496 63.85 83.89
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9. retro_mluc_1633 74.31 71.81
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10. retro_mluc_2151 89.93 99.33
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11. retro_mluc_2186 60.00 99.33
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12. retro_mluc_2257 98.65 99.33
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13. retro_mluc_2273 94.67 99.33
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Download FASTA sequences of all ENSMLUG00000011860 retrocopies