RetrogeneDB ID: | retro_etel_1535 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_277414:14318..14763(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 77.63 % |
Parental protein coverage: | 95.54 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | PATAPHPLKMYACAKFVSTPSLVRSTSQLLSRPLSVLVQKRP-ETLSDERFSSLTAPRSQTSLVPSRSFQ |
PAT.P.P.KM..CA..V.TPSLVR.TSQLLS.PLSVL.QK.P..TL.DERFSS.TAPRS.TSL.PS..F. | |
Retrocopy | PATTPLPIKMFTCANLVFTPSLVRNTSQLLSQPLSVLLQKQP<QTLTDERFSSWTAPRSLTSLIPSCRF* |
Parental | TSTVSRDIDTAAKFIGA-GAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLF |
TSTVSRDIDTA.KFIGA..AATVGVAG.GAGIGT.FGSLI..YA.NPSLKQQLF.Y.IL.FALSEAMG.F | |
Retrocopy | TSTVSRDIDTAPKFIGA<QAATVGVAGPGAGIGTGFGSLILSYASNPSLKQQLF-YTILDFALSEAMGIF |
Parental | CLMVAFLILFAM |
CLMVAFLILF.M | |
Retrocopy | CLMVAFLILFTM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |