RetrogeneDB ID: | retro_meug_1903 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold704:47440..47924(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSMEUG00000004661 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 86.59 % |
Parental protein coverage: | 87.43 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | PLCLLCSAG-SS-SAAPHPLRMYACTKLISAPALVRSSSQLLSRPLSAVVLKRPEVRTDENLSILAASG- |
P.CLLCSAG.SS.S.APHPLR.YACTKLISAPALVRSSSQLLSRPLSAVV.K.PEV.TDENLSILAAS.. | |
Retrocopy | PFCLLCSAGSSS<SFAPHPLRTYACTKLISAPALVRSSSQLLSRPLSAVVPKQPEVQTDENLSILAASKV |
Parental | PLTSLVP-RCGFQTSAVSRDVDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAI |
P...L.P.RCGFQTS.VSRD.DTAAKFIGAGAATVGVAGSG..IGTVFGSLIIGYA.NPSLKQQ.FSYAI | |
Retrocopy | P*PHLSP<RCGFQTSTVSRDIDTAAKFIGAGAATVGVAGSGTSIGTVFGSLIIGYAKNPSLKQQFFSYAI |
Parental | LGFALSEAMGLFCLMVAFLILFAM |
LGFALSEAMGLFCLMVAFLILF.M | |
Retrocopy | LGFALSEAMGLFCLMVAFLILFTM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |