RetrogeneDB ID: | retro_tsyr_147 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_3848:22068..22351(-) | ||
Located in intron of: | ENSTSYG00000001508 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSTSYG00000003433 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 81.63 % |
Parental protein coverage: | 52.46 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | PAPVCLLCTGSSSPA-TAPHPLKMYACSKFISTP-SLVKSTSQLLSRPLTAVVLKRPETLPDESLSSLAV |
PAPVCLL..GSSSPA.TAPHPLKM.ACSKF..TP.SLV.STSQLLSRPLTA.VLK.PETLPDESLSSLAV | |
Retrocopy | PAPVCLLRAGSSSPA<TAPHPLKMHACSKFVITP<SLVTSTSQLLSRPLTAAVLKQPETLPDESLSSLAV |
Parental | SHPLTSLVPSRSFQTSAVSRDIDTAAKF |
S.P.....PS.SFQTSAVSRDIDTA.KF | |
Retrocopy | SIPYL-IAPSCSFQTSAVSRDIDTAVKF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |