RetrogeneDB ID: | retro_etel_1427 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_263711:5104..5396(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 82.65 % |
Parental protein coverage: | 61.78 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | SPATAPHPLKMYACAKFVSTPSLVRSTSQLLSRPLSVLVQKRPET-LSDERFSSLTAPRSQTSLVPSRSF |
SPAT.PHPLKMYACAKFVSTPSLVRSTSQLLS.PLSVLVQK.PET.L.DE.FS.L..PRS.TSL.PS.SF | |
Retrocopy | SPATTPHPLKMYACAKFVSTPSLVRSTSQLLSWPLSVLVQKQPET>LADEHFSCLKTPRSLTSLIPS*SF |
Parental | QTSTVSRDIDTAAKFIGAGAATVGVAGS |
QTST.SRDIDTAAKF.GA.A.TVGVA.S | |
Retrocopy | QTSTISRDIDTAAKFTGARAVTVGVAVS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |