RetrogeneDB ID: | retro_meug_1322 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold36768:14310..14800(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSMEUG00000004661 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 86.75 % |
Parental protein coverage: | 89.07 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | SPPPLCLLCSAG-SS-SAAPHPLRMYACTKLISAPALVRSSSQLLSRPLSAVVLK-RPEVRTDENLSILA |
SPPPLCLLCS.G.SS.S.APHPLRMY.CTK.IS.PALVR.SSQLLSRPLSAVVL...PEVRTDE.LSILA | |
Retrocopy | SPPPLCLLCSSGSSS<SFAPHPLRMYTCTKFISTPALVRYSSQLLSRPLSAVVLQ<MPEVRTDEYLSILA |
Parental | ASGPLTSLVPRCGFQTSAVSRDVDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSY |
ASGPLTSLVPRCGFQT.AV.RD.DTAAKF.GA.AATVGVA.SGAGI.TVFGSLIIGY.RNPSLKQQLFSY | |
Retrocopy | ASGPLTSLVPRCGFQTRAV*RDIDTAAKFTGAEAATVGVAVSGAGIETVFGSLIIGYVRNPSLKQQLFSY |
Parental | AILGFALSEAMGLFCLMVAFLILFAM |
.ILGFALSEAMGLFCLMVAFLILFA. | |
Retrocopy | TILGFALSEAMGLFCLMVAFLILFAI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |