Parental gene:

ATP5G2, ENSPTRG00000005023

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:12:35575875..35587016(+)


>ENSPTRG00000005023
ATGCCTGAGCTGATCCTGTATGTTGCAATCACTCTATCCGTGGCTGAGCGACTCGTTGGCCCGGGTCACGCATGCGCTGA
GCCTTCCTTTCGCTCTTCCCGCTGCTCCGCCCCTCTCTGTCTTCTCTGCAGTGGGAGCAGCTCTCCTGCCACAGCTCCTC
ACCCCCTGAAAATGTTCGCCTGCTCCAAGTTCGTCTCCACTCCCTCCTTGGTCAAGAGCACCTCACAGCTGCTGAGCCGT
CCGCTATCTGCAGTGGTGCTGAAACGACCGGAGATACTGACAGATGAGAGCCTCAGCAGCTTGGCAGTCTCATGTCCCCT
TACCTCACTTGTCTCTAGCCGCAGCTTCCAAACCAGCGCCATTTCAAGGGACATCGACACAGCAGCCAAGTTCATTGGAG
CTGGGGCTGCCACAGTTGGGGTGGCTGGTTCTGGGGCTGGGATTGGAACTGTGTTTGGGAGCCTCATCATTGGTTATGCC
AGGAACCCTTCTCTGAAGCAACAGCTCTTCTCCTACGCCATTCTGGGCTTTGCCCTCTCGGAAGCCATGGGGCTCTTTTG
TCTGATGGTAGCCTTTCTCATCCTCTTCGCCATGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 99 .74 RPM
SRP007412_cerebellum 136 .80 RPM
SRP007412_heart 169 .34 RPM
SRP007412_kidney 204 .53 RPM
SRP007412_liver 118 .07 RPM
SRP007412_testis 28 .56 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000619 ortholog_one2one 18 retrogenes
Bos taurus ENSBTAG00000005735 ortholog_one2one 11 retrogenes
Cavia porcellus ENSCPOG00000022889 possible_ortholog 3 retrogenes
Equus caballus ENSECAG00000023021 ortholog_one2one 2 retrogenes
Erinaceus europaeus ENSEEUG00000003051 ortholog_one2one 1 retrogene
Echinops telfairi ENSETEG00000005968 ortholog_one2one 40 retrogenes
Felis catus ENSFCAG00000001502 ortholog_one2one 13 retrogenes
Homo sapiens ENSG00000135390 ortholog_one2one 6 retrogenes
Gorilla gorilla ENSGGOG00000015641 ortholog_one2one 5 retrogenes
Macropus eugenii ENSMEUG00000004661 ortholog_one2one 67 retrogenes
Microcebus murinus ENSMICG00000011686 ortholog_one2one 4 retrogenes
Myotis lucifugus ENSMLUG00000011860 ortholog_one2many 13 retrogenes
Macaca mulatta ENSMMUG00000016241 ortholog_one2one 3 retrogenes
Mustela putorius furo ENSMPUG00000005927 ortholog_one2one 6 retrogenes
Mus musculus ENSMUSG00000062683 ortholog_one2many 1 retrogene
Nomascus leucogenys ENSNLEG00000017686 ortholog_one2one 4 retrogenes
Oryctolagus cuniculus ENSOCUG00000008933 ortholog_one2one 4 retrogenes
Otolemur garnettii ENSOGAG00000003611 ortholog_one2one 4 retrogenes
Ochotona princeps ENSOPRG00000002978 ortholog_one2one 1 retrogene
Procavia capensis ENSPCAG00000008679 ortholog_one2one 3 retrogenes
Pongo abelii ENSPPYG00000004586 ortholog_one2one 7 retrogenes
Pan troglodytes ENSPTRG00000009364 within_species_paralog 8 retrogenes
Pteropus vampyrus ENSPVAG00000012291 ortholog_one2one 1 retrogene
Rattus norvegicus ENSRNOG00000015320 ortholog_one2one 6 retrogenes
Sorex araneus ENSSARG00000001027 ortholog_one2one 7 retrogenes
Sarcophilus harrisii ENSSHAG00000005726 ortholog_one2one 4 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000008217 ortholog_one2one 3 retrogenes
Tupaia belangeri ENSTBEG00000005748 ortholog_one2one 4 retrogenes
Tarsius syrichta ENSTSYG00000003433 ortholog_one2one 4 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_376 82.68 89.90
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2. retro_ptro_909 78.98 77.78
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3. retro_ptro_1668 84.38 80.81
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4. retro_ptro_1824 76.22 80.81
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5. retro_ptro_2563 60.14 71.21
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6. retro_ptro_3202 90.57 80.30
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Download FASTA sequences of all ENSPTRG00000005023 retrocopies