RetrogeneDB ID: | retro_sara_759 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_87914:4889..5244(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSSARG00000001027 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 56.56 % |
Parental protein coverage: | 76.43 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | SRSLSAVVLKRPET-PTDESRGSLAAPRPLTSLVPSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAG |
S......VLK.PE.....E..GSLA..............Q..A..RD.DTAAK.IGA.AATVGV.GSG.G | |
Retrocopy | SEQITVCVLKGPES<LRNEHMGSLATSQYHELSYSVHRIQINALFRDTDTAAKCIGAEAATVGVTGSGVG |
Parental | IGTVFGSLIIGYARNPSLKQQLFSYAIL-GFALSEAMGLFCLMVAFLILFAM |
.GTVFG.LIIGY.RNPS.K.QLFSY.IL..FAL..AMGL..L.V...ILFAM | |
Retrocopy | TGTVFGTLIIGYTRNPSMK-QLFSYVIL<AFALGAAMGLLFLLVTLNILFAM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |