RetrogeneDB ID: | retro_amel_1610 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193729.1:233719..234085(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSAMEG00000000619 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 58.73 % |
Parental protein coverage: | 63.96 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | EERLVGAGRACAESSFRSSRSPAPLCLLCTGSRLSATAPHPLKMYACAKFVSTPFLAKSTSQLLSRSLSA |
E.....AG....ES.....R.P.P.CLL...S...A..P.PLK..ACAKF....F...STSQLL.RSLSA | |
Retrocopy | EYSMEDAGNTPKESLRKGGRAPGPVCLLHRESSSPAN-PQPLKTGACAKFI---FSVRSTSQLLNRSLSA |
Parental | VVLKPPETLTDESLSSLAAPRPLTSLIPSRSFQTSAISRDIDTAAKFIGAGAATVG |
.V.KPPE.LT..S.SS.AAP.PLTS.IPS.SFQTSA.S.DI..AA.FIG.GAATVG | |
Retrocopy | AV*KPPEMLTVDSPSSWAAPCPLTSHIPSCSFQTSALSWDIVMAAEFIGTGAATVG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |