RetrogeneDB ID: | retro_etel_1007 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_199777:3985..4328(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 81.2 % |
Parental protein coverage: | 73.25 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | VLVQKRPETLSDERFSSLTAPRSQTSLVPSRSFQTSTVSRDIDTAAKFIG-AGAATVGVAG-SGAGIGTV |
VLVQK.PETL.DE.FSSLTAPRS.TSL.PS.SF..S..SRDIDTAAKFIG..GAATVGVA..SGAGIGT. | |
Retrocopy | VLVQKQPETLTDEHFSSLTAPRSLTSLIPSCSF*ASIISRDIDTAAKFIG<VGAATVGVAS<SGAGIGTG |
Parental | FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM |
FGSLI.G.AR.PSLKQ.LFSY.ILGFA.S.AMGLFCLMVAFLILFAM | |
Retrocopy | FGSLILGCARTPSLKQ*LFSYTILGFAFSKAMGLFCLMVAFLILFAM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |