RetrogeneDB ID: | retro_meug_1602 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold4756:2911..3383(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSMEUG00000004661 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 66.26 % |
Parental protein coverage: | 87.98 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | PPLCLLCSAGSSSAAPHPLRMYACTKLISAPALVRSS-SQLLSRPLSAVVLKRPEVRTDENLSILAASGP |
P.L.LL......S...H.LRM.AC.K.IS.PA.VR...S.LLS.PLS.VVLK.P.V.T..N.SILAASGP | |
Retrocopy | PSLSLLLCLQIFSFVLHLLRMEACPKVISTPAHVRTT<S*LLSTPLSLVVLK*PDVPTYKNFSILAASGP |
Parental | -LTSLVPRCGFQTSAVSRDVDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAIL |
.LTSLVPRCGFQT...SRD.D.A..FIG.GAATV.V.G.G.G.GTVFG.LII.YA...SLK.QLF.Y.IL | |
Retrocopy | <LTSLVPRCGFQTRTISRDIDRASNFIGVGAATV*VIGFGIGVGTVFGNLIISYA---SLKKQLFLYTIL |
Parental | GFALSEAMGLFCLMVAFLILFAM |
GF.LSEAMGLFCLMV.FLILF.. | |
Retrocopy | GFVLSEAMGLFCLMVTFLILFTI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |