RetrogeneDB ID: | retro_etel_1771 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_293612:93783..94194(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000004093 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 54.01 % |
Parental protein coverage: | 87.26 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | PATAPHPLKMYACAKFVSTPSLVRSTSQLLSRPLSVLVQKRPETLSDERFSSLTAPRSQTSLVPSRSFQT |
PAT.P..L....C.K..S.PS..R..S....RP.S..V..RPE....E............S....R.F.T | |
Retrocopy | PATPPWRL*DVSCIKLASMPSGLRAGSRVAYRPISASVLYRPEARTGEGSAVFNGVQAGVSPLIRREFRT |
Parental | STVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGL |
S...RDID.AAKF.GAGAATVGV.G.GAG.G.VFGSL.IGYARNPSLK.Q.F.YAI.GFA.SE..GL | |
Retrocopy | SASGRDIDPAAKFTGAGAATVGVTGAGAGVGNVFGSLFIGYARNPSLKHQPFTYAIQGFATSEDTGL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |