RetrogeneDB ID: | retro_etel_2127 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_69998:176..535(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 74.59 % |
Parental protein coverage: | 77.07 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | LSRPLSVLVQKRPETLSDERFSSLTAPRSQTSLVPSRSFQTSTVSRDIDTAAKFIGAGAATVGVAG-SGA |
L....SVLVQK..ETL.DE.FSSLT.P.S.TSL.P..SF.....SRDIDTAAKFIG.GAATVGVA..SGA | |
Retrocopy | LTQLVSVLVQKQLETLTDEYFSSLTGPHSLTSLTPTPSF*ACIISRDIDTAAKFIGGGAATVGVAS<SGA |
Parental | GIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM |
.IGT.FGSLI.G.AR.PSLKQ.L.SY.ILGFALS.AMGLFCLMVAFLILFAM | |
Retrocopy | SIGTGFGSLILGCARTPSLKQ*L-SYTILGFALSKAMGLFCLMVAFLILFAM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |