RetrogeneDB ID: | retro_etel_260 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_4412:40889..41186(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 85.44 % |
Parental protein coverage: | 63.69 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | SPATAPHPLKMYACAKFVSTPSLVRSTSQL-LSRPLSVLVQKRPETLSDERFSSLTAPRSQTSLVPSRSF |
SPATAPHPLKMYA.AKFVSTPSLVRSTSQL.LSRPL.VLVQKRPETL.DERFSSL.APRS.TSL.PS.SF | |
Retrocopy | SPATAPHPLKMYARAKFVSTPSLVRSTSQL<LSRPLYVLVQKRPETLTDERFSSLAAPRSLTSLIPSHSF |
Parental | QTSTVSRDIDTAAKFIGA-GAATVG-VAGSGAG |
Q.STVS.D.DTAAKF.GA.GAATVG..AGSGAG | |
Retrocopy | QPSTVSKDMDTAAKFTGA<GAATVG<RAGSGAG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |