RetrogeneDB ID: | retro_etel_1591 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_281346:14426..14787(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 73.98 % |
Parental protein coverage: | 77.07 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | LSRPLSVLVQKRPETLSDERFSSLTAPRSQTSLVPSRSFQTSTVSRDIDTAAKFIGAG-AATVGVAG-SG |
L...LSVL.QK..ETL.DE..SSL.APRS.TSL.PSRSF..S..SRDIDTAAKFIG.G.AATVGVA..SG | |
Retrocopy | LTQLLSVLMQKQSETLTDEHVSSLAAPRSLTSLIPSRSF*ASIISRDIDTAAKFIGVG<AATVGVAS<SG |
Parental | AGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM |
.G.G..FGSLI.G.AR.PSLKQ.LFSY.ILGFA.S.A.GLFCLMVAFLILFAM | |
Retrocopy | VGTGAGFGSLILGCARTPSLKQ*LFSYTILGFAFSKAVGLFCLMVAFLILFAM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |