RetrogeneDB ID: | retro_etel_2207 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_98634:6805..7252(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 77.78 % |
Parental protein coverage: | 96.18 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | SPATAPHPLKMYACAKFVSTPSLVRSTSQLLSRPLSVLVQKRPETLSDERFSSLTAPRSQTSLVPSRSFQ |
.P.TAPHPLKMYAC.KFVST.SL.RSTSQLL...L.VLVQ..PETL.DE.FSSLTAPRS.TSL.PSRSF. | |
Retrocopy | APNTAPHPLKMYACVKFVSTLSLIRSTSQLLT*SLFVLVQIQPETLTDEHFSSLTAPRSLTSLIPSRSF* |
Parental | TSTVSRDIDTAAKFIGAGAATVGVAG-SGAGIGTVFG-SLIIGYARNPSLKQQLFSYAILGFALSEAMGL |
.ST.SRDIDTAAKF.GAGAATVGVAG.SGA.IG...G.S.I.GY.RNPSLKQQLFSY.ILGFA.S...GL | |
Retrocopy | ASTISRDIDTAAKFLGAGAATVGVAG>SGACIGSMLG<SVILGYTRNPSLKQQLFSYIILGFAFSK--GL |
Parental | FCLMVAFLILFAM |
FCLM.AFLILFAM | |
Retrocopy | FCLMMAFLILFAM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |