RetrogeneDB ID: | retro_etel_2216 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_99810:3443..3803(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 73.17 % |
Parental protein coverage: | 77.07 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | LSRPLSVLVQKRPETLSDERFSSLTAPRSQTSLVPSRSFQTSTVSRDIDTAAKF-IGAGAATVGVAG-SG |
L.....VLVQK.PETL.DE.FSSLTAPRS..SL.PS.SF..S..S.DIDTAAKF..G.G.ATVGVA..SG | |
Retrocopy | LTQLFCVLVQKQPETLRDEHFSSLTAPRSLNSLIPSCSF*ASIISKDIDTAAKF>LG-GVATVGVAS<SG |
Parental | AGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM |
.GI.T.FGSLI.G.AR.PSLK..LFSY.ILGFALS.AMGLFCLMVAFLILFAM | |
Retrocopy | VGIRTGFGSLILGCARTPSLKE*LFSYTILGFALSKAMGLFCLMVAFLILFAM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |